BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F06LP1|AL428088
(1089 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1960 0.0
>3x_Contig1461
Length = 5478
Score = 1960 bits (988), Expect = 0.0
Identities = 1073/1094 (98%), Gaps = 6/1094 (0%)
Strand = Plus / Plus
Query: 1 gaaacaagtttccatactcgcgtcggaagcaacaattcaacagtttttacactatcaaat 60
||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 2138 gaaacaattttccatactcgcttcaaaagcaacaattcaacagtttttacactatcaaat 2197
Query: 61 catcacaacccctccatgccatagcactctttgagtttcctctaaccgacttccactgaa 120
||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 2198 catcacaacccctccattccatagcactctttaattttcctctaaccaacttccactgaa 2257
Query: 121 cactgctccgatgtttcgcagaaacagaa-cgttcaatatcatc-ggccaaagagga-gg 177
||||||||| || ||||||| |||||||| |||||||||||||| |||||||||||| ||
Sbjct: 2258 cactgctccaatttttcgcaaaaacagaaacgttcaatatcatccggccaaagaggaagg 2317
Query: 178 ttacactcacagaatcacagacaaccaaagtcgcccggctattctgtaaggcattccccc 237
||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 2318 ttacactcacaaaatcacaaacaaccaaagtcgccccgctattctgtaaggcattccccc 2377
Query: 238 aaatatggtttctttggtttggattgccattggctagtaatccaccaaatcctccactgc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2378 aaatatggtttctttggtttggattgccattggctagtaatccaccaaatcctccactgc 2437
Query: 298 tcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagcatcttt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2438 tcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcagcatcttt 2497
Query: 358 cgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatctgacgatc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2498 cgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatctgacgatc 2557
Query: 418 acctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgactacatc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2558 acctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacgactacatc 2617
Query: 478 caaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgcat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2618 caaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgctttcgcat 2677
Query: 538 gaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctcacg-tt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2678 gaagtacctcccggcctatttttctcacccgtggtcttctttctattagccctcacgttt 2737
Query: 597 ctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttttc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2738 ctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttatttttttc 2797
Query: 657 agtattttttcaaatggtaaaattcgcacttttagctttttttcttccccttctttttca 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2798 agtattttttcaaatggtaaaattcgcacttttagctttttttcttccccttctttttca 2857
Query: 717 tcaacgattctcccctttatatacaaatctcgattttcgtttttgtgtttccctttttat 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2858 tcaacgattctcccctttatatacaaatctcgattttcgtttttgtgtttccctttttat 2917
Query: 777 tttttcactcctgttaa-gaggataatcccactggttgagaagaaaataaaaaaaacaaa 835
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2918 tttttcactcctgttaaggaggataatcccactggttgagaagaaaataaaaaaaacaaa 2977
Query: 836 taaaaaaaatacagatggtgattcatctggcactctctcctttcagacctaaaattcaac 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2978 taaaaaaaatacagatggtgattcatctggcactctctcctttcagacctaaaattcaac 3037
Query: 896 actgttctgccacattattccttgcatgaaataagagcagcagcattacaacatgagcta 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3038 actgttctgccacattattccttgcatgaaataagagcagcagcattacaacatgagcta 3097
Query: 956 ctgtacatctacacgagcagtattattcttcttcgttttgacataataataattgtttta 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3098 ctgtacatctacacgagcagtattattcttcttcgttttgacataataataattgtttta 3157
Query: 1016 gatcccagagatagttctttcaatcgaagtagtctctagaattgcattgctccctgttcg 1075
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3158 gatcccagagatagttc-ttcaatcgaagtagtctctagaattgcattgctccctgttcg 3216
Query: 1076 ttttttgtatyttg 1089
|||||||||| |||
Sbjct: 3217 ttttttgtatcttg 3230
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,121
Number of Sequences: 1807
Number of extensions: 11121
Number of successful extensions: 178
Number of sequences better than 1.0e-20: 1
length of query: 1089
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1073
effective length of database: 10,329,639
effective search space: 11083702647
effective search space used: 11083702647
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)